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Karen Junge

Senior Oceanographer

Email

kajunge@uw.edu

Phone

206-543-8938

Department Affiliation

Polar Science Center

Publications

2000-present and while at APL-UW

Proteomic insights into psychrophile growth in perchlorate-amended subzero conditions: Implications for Martian life detection

Gentihomme, A.S., K. Dhakar, E. Timmins-Schiffman, M. Chaw, E. Firth, K. Junge, and B.L. Nunn, "Proteomic insights into psychrophile growth in perchlorate-amended subzero conditions: Implications for Martian life detection," Astrobiology, 25, doi:10.1089/ast.2024.0065, 2025.

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18 Mar 2025

Since the discovery of perchlorates in martian soils, astrobiologists have been curious if and how life could survive in these low-water, high-salt environments. Perchlorates induce chaotropic and oxidative stress but can also confer increased cold tolerance in some extremophiles. Though bacterial survival has been demonstrated at subzero temperatures and in perchlorate solution, proteomic analysis of cells growing in an environment like martian regolith brines–perchlorate with subzero temperatures–has yet to be demonstrated. By defining biosignatures of survival and growth in perchlorate-amended media at subzero conditions, we move closer to understanding the mechanisms that underlie the feasibility of life on Mars. Colwellia psychrerythraea str. 34H (Cp34H), a marine psychrophile, was exposed to perchlorate ions in the form of a diluted Phoenix Mars Lander Wet Chemistry Laboratory solution at –1°C and –5°C. At both temperatures in perchlorate-amended media, Cp34H grew at reduced rates. Mass spectrometry-based proteomics analyses revealed that proteins responsible for mitigating effects of oxidative and chaotropic stress increased, while cellular transport proteins decreased. Cumulative protein signatures suggested modifications to cell–cell or cell–surface adhesion properties. These physical and biochemical traits could serve as putative identifiable biosignatures for life detection in martian environments.

Metabolic responses, cell recoverability, and protein signatures of three extremophiles: Sustained life during long-term subzero incubations

Ewert, M., B.L. Nunn, E. Firth, and K. Junge, "Metabolic responses, cell recoverability, and protein signatures of three extremophiles: Sustained life during long-term subzero incubations," Microorganisms, 13, doi:, 2025.

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1 Feb 2025

Few halophilic strains have been examined in detail for their culturability and metabolic activity at subzero temperatures, within the ice matrix, over the longer term. Here, we examine three Arctic strains with varied salinity tolerances: Colwellia psychrerythraea str. 34H (Cp34H), Psychrobacter sp. str. 7E (P7E), and Halomonas sp. str. 3E (H3E). As a proxy for biosignatures, we examine observable cells, metabolic activity, and recoverability on 12-month incubations at –5, –10 and –36°C. To further develop life-detection strategies, we also study the short-term tracking of new protein synthesis on Cp34H at –5°C for the first time, using isotopically labeled 13C6-leucine and mass spectrometry-based proteomics. All three bacterial species remained metabolically active after 12 months at –5°C, while recoverability varied greatly among strains. At –10 and –36°C, metabolic activity was drastically reduced and recoverability patterns were strain-specific. Cells were observable at high numbers in all treatments, validating their potential as biosignatures. Newly synthesized proteins were detectable and identifiable after one hour of incubation. Proteins prioritized for synthesis with the provided substrate are involved in motility, protein synthesis, and in nitrogen and carbohydrate metabolism, with an emphasis on structural proteins, enzymatic activities in central metabolic pathways, and regulatory functions.

Subzero, saline incubations of Colwellia psychrerythraea reveal strategies and biomarkers for sustained life in extreme icy environments

Mudge, M.C., B.L. Nunn, E. Firth, M. Ewert, K. Hales, W.E. Fondrie, W.S. Noble, J. Toner, B. Light, and K.A. Junge, "Subzero, saline incubations of Colwellia psychrerythraea reveal strategies and biomarkers for sustained life in extreme icy environments," Environ. Microbiol., 23, 3840-3866, doi:10.1111/1462-2920.15485, 2021.

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1 Jul 2021

Colwellia psychrerythraea is a marine psychrophilic bacterium known for its remarkable ability to maintain activity during long‐term exposure to extreme subzero temperatures and correspondingly high salinities in sea ice. These microorganisms must have adaptations to both high salinity and low temperature to survive, be metabolically active, or grow in the ice. Here, we report on an experimental design that allowed us to monitor culturability, cell abundance, activity and proteomic signatures of C. psychrerythraea strain 34H (Cp34H) in subzero brines and supercooled sea water through long‐term incubations under eight conditions with varying subzero temperatures, salinities and nutrient additions. Shotgun proteomics found novel metabolic strategies used to maintain culturability in response to each independent experimental variable, particularly in pathways regulating carbon, nitrogen and fatty acid metabolism. Statistical analysis of abundances of proteins uniquely identified in isolated conditions provide metabolism‐specific protein biosignatures indicative of growth or survival in either increased salinity, decreased temperature, or nutrient limitation. Additionally, to aid in the search for extant life on other icy worlds, analysis of detected short peptides in –10°C incubations after 4 months identified over 500 potential biosignatures that could indicate the presence of terrestrial‐like cold‐active or halophilic metabolisms on other icy worlds.

More Publications

Acoustics Air-Sea Interaction & Remote Sensing Center for Environmental & Information Systems Center for Industrial & Medical Ultrasound Electronic & Photonic Systems Ocean Engineering Ocean Physics Polar Science Center
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