We examine the structure and drivers of anomalous phytoplankton biomass in Southern Ocean eddies tracked in a global, multiyear, eddy‐resolving, 3‐D ocean simulation of the Community Earth System Model. We examine how simulated anticyclones and cyclones differentially modify phytoplankton biomass concentrations, growth rates, and physical transport. On average, cyclones induce negative division rate anomalies that drive negative net population growth rate anomalies, reduce dilution across shallower mixed layers, and advect biomass anomalously downward via eddy‐induced Ekman pumping. The opposite is true in anticyclones. Lateral transport is dominated by eddy stirring rather than eddy trapping. The net effect on anomalous biomass can exceed 10–20% of background levels at the regional scale, consistent with observations. Moreover, we find a strong seasonality in the sign and magnitude of regional anomalies and the processes that drive them. The most dramatic seasonal cycle is found in the South Pacific Antarctic Circumpolar Current, where physical and biological processes dominate at different times, modifying biomass in different directions throughout the year. Here, in cyclones, during winter, anomalously shallow mixed layer depths first drive positive surface biomass anomalies via reduced dilution, and later drive positive depth‐integrated biomass anomalies via reduced light limitation. During spring, reduced iron availability and elevated grazing rates suppress net population growth rates and drive the largest annual negative surface and depth‐integrated biomass anomalies. During summer and fall, lateral stirring and eddy‐induced Ekman pumping create small negative surface anomalies but positive depth‐integrated anomalies. The same mechanisms drive biomass anomalies in the opposite direction in anticyclones.

The North Atlantic phytoplankton spring bloom is the pinnacle in an annual cycle that is driven by physical, chemical, and biological seasonality. Despite its important contributions to the global carbon cycle, transitions in plankton community composition between the winter and spring have been scarcely examined in the North Atlantic. Phytoplankton composition in early winter was compared with latitudinal transects that captured the subsequent spring bloom climax. Amplicon sequence variants (ASVs), imaging flow cytometry, and flow-cytometry provided a synoptic view of phytoplankton diversity. Phytoplankton communities were not uniform across the sites studied, but rather mapped with apparent fidelity onto subpolar- and subtropical-influenced water masses of the North Atlantic. At most stations, cells < 20-μm diameter were the main contributors to phytoplankton biomass. Winter phytoplankton communities were dominated by cyanobacteria and pico-phytoeukaryotes. These transitioned to more diverse and dynamic spring communities in which pico- and nano-phytoeukaryotes, including many prasinophyte algae, dominated. Diatoms, which are often assumed to be the dominant phytoplankton in blooms, were contributors but not the major component of biomass. We show that diverse, small phytoplankton taxa are unexpectedly common in the western North Atlantic and that regional influences play a large role in modulating community transitions during the seasonal progression of blooms.

During the North Atlantic Aerosols and Marine Ecosystems Study in the western North Atlantic, float‐based profiles of fluorescent dissolved organic matter and backscattering exhibited distinct spike layers at ~ 300 m. The locations of the spikes were at depths similar or shallower to where a ship‐based scientific echo sounder identified layers of acoustic backscatter, an Underwater Vision Profiler detected elevated concentration of zooplankton, and mesopelagic fish were sampled by a mesopelagic net tow. The collocation of spike layers in bio‐optical properties with mesopelagic organisms suggests that some can be detected with float‐based bio‐optical sensors. This opens the door to the investigation of such aggregations/layers in observations collected by the global biogeochemical‐Argo array allowing the detection of mesopelagic organisms in remote locations of the open ocean under‐sampled by traditional methods.

Results from our 2017 cruise to the Santa Barbara Channel illustrate the value that student leadership training can bring to ocean science. The Across the Channel: Investigating Diel Dynamics (ACIDD) mission, conducted from December 16 to 22, 2017, aboard R/V Sally Ride, was led by two PhD students as co-principal investigators and chief scientists (authors Bisson and Baetge). The 21-​member science team was composed almost entirely of our graduate student peers at the University of California, Santa Barbara (UCSB), as well as three artists. As an integrated team, we conceived, adapted, and executed research cruise plans and developed far-​reaching connections with the public based on our coupled artistic-​oceanographic pursuit.

Every night across the world's oceans, numerous marine animals arrive at the surface of the ocean to feed on plankton after an upward migration of hundreds of metres. Just before sunrise, this migration is reversed and the animals return to their daytime residence in the dark mesopelagic zone (at a depth of 200–1,000 m). This daily excursion, referred to as diel vertical migration (DVM), is thought of primarily as an adaptation to avoid visual predators in the sunlit surface layer and was first recorded using ship-net hauls nearly 200 years ago. Nowadays, DVMs are routinely recorded by ship-mounted acoustic systems (for example, acoustic Doppler current profilers). These data show that night-time arrival and departure times are highly conserved across ocean regions and that daytime descent depths increase with water clarity, indicating that animals have faster swimming speeds in clearer waters. However, after decades of acoustic measurements, vast ocean areas remain unsampled and places for which data are available typically provide information for only a few months, resulting in an incomplete understanding of DVMs. Addressing this issue is important, because DVMs have a crucial role in global ocean biogeochemistry. Night-time feeding at the surface and daytime metabolism of this food at depth provide an efficient pathway for carbon and nutrient export.

Here we use observations from a satellite-mounted light-detection-and-ranging (lidar) instrument to describe global distributions of an optical signal from DVM animals that arrive in the surface ocean at night. Our findings reveal that these animals generally constitute a greater fraction of total plankton abundance in the clear subtropical gyres, consistent with the idea that the avoidance of visual predators is an important life strategy in these regions. Total DVM biomass, on the other hand, is higher in more productive regions in which the availability of food is increased. Furthermore, the 10-year satellite record reveals significant temporal trends in DVM biomass and correlated variations in DVM biomass and surface productivity. These results provide a detailed view of DVM activities globally and a path for refining the quantification of their biogeochemical importance.

Mesoscale eddies are critical components of the ocean’s "internal weather" system. Mixing and stirring by eddies exerts significant control on biogeochemical fluxes in the open ocean, and eddies may trap distinctive plankton communities that remain coherent for months and can be transported hundreds to thousands of kilometers. Debate regarding how and why predators use fronts and eddies, for example as a migratory cue, enhanced forage opportunities, or preferred thermal habitat, has been ongoing since the 1950s. The influence of eddies on the behavior of large pelagic fishes, however, remains largely unexplored. Here, we reconstruct movements of a pelagic predator, the blue shark (Prionace glauca), in the Gulf Stream region using electronic tags, earth-observing satellites, and data-assimilating ocean forecasting models. Based on >2,000 tracking days and nearly 500,000 high-resolution time series measurements collected by 15 instrumented individuals, we show that blue sharks seek out the interiors of anticyclonic eddies where they dive deep while foraging. Our observations counter the existing paradigm that anticyclonic eddies are unproductive ocean "deserts" and suggest anomalously warm temperatures in these features connect surface-oriented predators to the most abundant fish community on the planet in the mesopelagic. These results also shed light on the ecosystem services provided by mesopelagic prey. Careful consideration will be needed before biomass extraction from the ocean twilight zone to avoid interrupting a key link between planktonic production and top predators. Moreover, robust associations between targeted fish species and oceanographic features increase the prospects for effective dynamic ocean management.

The shortbill spearfish (Tetrapturus angustirostris) is an understudied, istiophorid billfish primarily encountered as bycatch in pelagic commercial fisheries of the Indo-Pacific. The species is listed as data-deficient, and little is known of its biology, ecology, and population structure or status. We assessed the species' movement ecology and thermal niche with telemetry data from the first shortbill spearfishes ever outfitted with pop-up satellite archival transmitting tags (n = 3 with successfully transmitted data). Short (4–15 day) deployments offshore of the Island of Hawai'i revealed that spearfish primarily occupied the mixed layer, spending >90% of each 24-hr period between the surface and 100 m in water temperatures between 24–26°C. These individuals consistently exhibited vertical activity at night regardless of the prevailing lunar phase. Nocturnal movements throughout the mixed layer may enable shortbill spearfish to forage on mesopelagic species undergoing diel vertical migration and reduce trophic niche overlap with primarily diurnal, pelagic species. The narrow thermal distribution of shortbill spearfish in this study, almost exclusively within 2°C of sea surface temperature, suggests that they are more stenothermal than extra-generic istiophorid species.

The Mediterranean spearfish (Tetrapturus belone) is one of the least‐studied istiophorid billfishes, with little known of its biology, ecology, and behavior. To assess the species' movement and thermal niche, we analyzed telemetry data from, to our knowledge, the first and only Mediterranean spearfish ever outfitted with a pop‐up satellite archival transmitting tag. Throughout a 29‐day deployment during July and August 2015, the fish travelled in Italian waters of the Tyrrhenian and Ligurian Seas, spending on average 93% of each 24‐hr period above 30 m and exhibiting a diel activity pattern comprised of daytime vertical movement and nighttime near‐surface residency. The preferred thermal niche was 26–28°C, but the spearfish experienced temperatures as low as 14.2°C during descents. Vertical distribution was limited throughout the deployment with more time spent at depth in areas where the thermocline was comparatively deeper and weaker, consistent with habitat compression experienced by other billfishes.

Sea Surface Temperature (SST) modifies the turbulent mixing, drag, and pressure gradients within the marine atmospheric boundary layer that accelerate near‐surface flow from cool to warm SST and decelerate the flow from warm to cool SST. This phenomenon is well documented on scales of 100–1,000 km (the oceanic mesoscale); however, the nature of this air–sea coupling at scales on the order of 1–10 km (the submesoscale) remains unknown. The Advanced Spaceborne Thermal Emission and Reflection Radiometer can be used to study submesoscale phenomena because the high‐resolution infrared and near‐infrared images can used to estimate both SST and wind speed. Observations of dramatic temperature and wind gradients along the Gulf Stream landward edge are used to examine the surface wind response to submesoscale fronts in SST. Our analysis indicates that SST‐induced wind speed perturbations are observed at the scales of order 1–10 km, significantly smaller than previously suggested.

Mesoscale eddies, energetic vortices covering nearly a third of the ocean surface at any one time, modulate the spatial and temporal evolution of the mixed layer. We present a global analysis of concurrent satellite observations of mesoscale eddies with hydrographic profiles by autonomous Argo floats, revealing rich geographic and seasonal variability in the influence of eddies on mixed layer depth. Anticyclones deepen the mixed layer depth, whereas cyclones thin it, with the magnitude of these eddy‐induced mixed layer depth anomalies being largest in winter. Eddy‐centric composite averages reveal that the largest anomalies occur at the eddy center and decrease with distance from the center. Furthermore, the extent to which eddies modulate mixed layer depth is linearly related to the sea surface height amplitude of the eddies. Finally, large eddy‐mediated mixed layer depth anomalies are more common in anticyclones when compared to cyclones. We present candidate mechanisms for this observed asymmetry.

Chlorophyll rings (CRs) are defined as elevated chlorophyll along eddy peripheries and have been observed in anticyclonic oceanic eddies occasionally. This study presents observations of CRs around both anticyclonic and cyclonic eddies from a large observational data set. An innovative algorithm is developed to identify CRs from satellite observations of sea level anomalies and near-surface chlorophyll concentration in the North Pacific Ocean between 2003 and 2010. The results show that only 1% of mesoscale eddies are associated with CRs, which implies the CRs are not ubiquitous. We propose two potential generation mechanisms for CRs: horizontal advection and wind-current interaction. The former dominates the formation of about two-thirds of the CRs. The CRs associated with both cyclones and anticyclones represents an important contribution to better understanding of mesoscale physical/biological coupled phenomena.

Southern Ocean mesoscale eddies play an important role in ocean circulation and biogeochemical cycling, but their biological characteristics have not been well quantified at the basin scale. To address this, we combined a 15‐year tracked eddy data set with satellite observations of ocean color, sea surface temperature, and autonomous profiling floats to quantify the surface and subsurface properties of eddies. Anomalies of surface temperature and chlorophyll were examined in eddy‐centric composite averages constructed from thousands of eddies. Normalized surface chlorophyll anomalies (chl_norm) vary seasonally and geographically. Cyclones typically show positive chl_norm, while anticyclones have negative chl_norm. The sign of chl_norm reverses during late summer and autumn for eddies between the Subtropical and Polar Fronts. The reversal is most obvious in the Indian sector, and we attribute this to a combination of eddy stirring (deformation of surface gradients by the rotational velocity of an eddy) and deeper winter mixing in anticyclones. Both chl_norm and sea surface temperature anomalies transition from dipole structures north of the Subtropical Front to monopole structures south of the Subantarctic Front. Sea surface temperature and chl_norm composites provide evidence for eddy trapping (transporting of anomalies) and eddy stirring. This research provides a basin‐scale study of surface chlorophyll in Southern Ocean eddies and reveals counterintuitive biogeochemical signals.

The Antarctic Circumpolar Current has highly energetic mesoscale phenomena, but their impacts on phytoplankton biomass, productivity, and biogeochemical cycling are not understood well. We analyze satellite observations and an eddy‐rich ocean model to show that they drive chlorophyll anomalies of opposite sign in winter versus summer. In winter, deeper mixed layers in positive sea surface height (SSH) anomalies reduce light availability, leading to anomalously low chlorophyll concentrations. In summer with abundant light, however, positive SSH anomalies show elevated chlorophyll concentration due to higher iron level, and an iron budget analysis reveals that anomalously strong vertical mixing enhances iron supply to the mixed layer. Features with negative SSH anomalies exhibit the opposite tendencies: higher chlorophyll concentration in winter and lower in summer. Our results suggest that mesoscale modulation of iron supply, light availability, and vertical mixing plays an important role in causing systematic variations in primary productivity over the seasonal cycle.

Satellite-tracking of mature white sharks (Carcharodon carcharias) has revealed open-ocean movements spanning months and covering tens of thousands of kilometers. But how are the energetic demands of these active apex predators met as they leave coastal areas with relatively high prey abundance to swim across the open ocean through waters often characterized as biological deserts? Here we investigate mesoscale oceanographic variability encountered by two white sharks as they moved through the Gulf Stream region and Sargasso Sea in the North Atlantic Ocean. In the vicinity of the Gulf Stream, the two mature female white sharks exhibited extensive use of the interiors of clockwise-rotating anticyclonic eddies, characterized by positive (warm) temperature anomalies. One tagged white shark was also equipped with an archival tag that indicated this individual made frequent dives to nearly 1,000 m in anticyclones, where it was presumably foraging on mesopelagic prey. We propose that warm temperature anomalies in anticyclones make prey more accessible and energetically profitable to adult white sharks in the Gulf Stream region by reducing the physiological costs of thermoregulation in cold water. The results presented here provide valuable new insight into open ocean habitat use by mature, female white sharks that may be applicable to other large pelagic predators.

Horizontal and vertical motions associated with coherent mesoscale structures, including eddies and meanders, are responsible for significant global transports of many properties, including heat and mass. Mesoscale vertical fluxes also influence upper ocean biological productivity by mediating the supply of nutrients into the euphotic layer, with potential impacts on the global carbon cycle. The Brazil-Malvinas Confluence (BMC) is a western boundary current region in the South Atlantic with intense mesoscale activity. This region has an active role in the genesis and transformation of water masses and thus is a critical component of the Atlantic meridional overturning circulation. The collision between the Malvinas and Brazil Currents over the Patagonian shelf/slope creates an energetic front that translates offshore to form a vigorous eddy field. Recent improvements in gridded altimetric sea level anomaly fields allow us to track BMC mesoscale eddies with high spatial and temporal resolutions using an automated eddy tracker. We characterize the eddies across fourteen 5° × 5° subregions. Eddy-centric composites of tracers and geostrophic currents diagnosed from a global reanalysis of surface and in situ data reveal substantial subregional heterogeneity. The in situ data are also used to compute the evolving quasi-geostrophic vertical velocity (QG-ω) associated with each instantaneous eddy instance. The QG-ω eddy composites have the expected dipole patterns of alternating upwelling/downwelling, however, the magnitude and sign of azimuthally averaged vertical velocity varies among subregions. Maximum eddy values are found near fronts and sharp topographic gradients. In comparison with regional eddy composites, subregional composites provide refined information about mesoscale eddy heterogeneity.

Highlights

• Eddies and meanders of the Gulf Stream entrain and trap water with distinct near-surface chlorophyll concentration.

• Following formation, chlorophyll in anticyclonic eddies is observed to increase.

• The positive chlorophyll trend in anticyclonic eddies is reproduced in a simulation including eddy-induced Ekman pumping.

Marine animals, such as turtles, seabirds and pelagic fishes, are observed to travel and congregate around eddies in the open ocean. Mesoscale eddies, large swirling ocean vortices with radius scales of approximately 50–100 km, provide environmental variability that can structure these populations. In this study, we investigate the use of mesoscale eddies by 24 individual juvenile loggerhead sea turtles (Caretta caretta) in the Brazil-Malvinas Confluence region. The influence of eddies on turtles is assessed by collocating the turtle trajectories to the tracks of mesoscale eddies identified in maps of sea level anomaly. Juvenile loggerhead sea turtles are significantly more likely to be located in the interiors of anticyclones in this region. The distribution of surface drifters in eddy interiors reveals no significant association with the interiors of cyclones or anticyclones, suggesting higher prevalence of turtles in anticyclones is a result of their behavior. In the southern portion of the Brazil-Malvinas Confluence region, turtle swimming speed is significantly slower in the interiors of anticyclones, when compared to the periphery, suggesting that these turtles are possibly feeding on prey items associated with anomalously low near-surface chlorophyll concentrations observed in those features.